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  5. Complementing model species with model clades.

Complementing model species with model clades.

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Resource type
Journal article
Creator (person)
Mabry, Makenzie E.
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Abrahams, R. Shawn
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Al-Shehbaz, Ihsan A.
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Baker, William J.
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Barak, Simon
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Barker, Michael S.
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Barrett, Russell L.
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Beric, Aleksandra
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Bhattacharya, Samik
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Carey, Sarah B.
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Conant, Gavin C.
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Conran, John G.
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Dassanayake, Maheshi
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Edger, Patrick P.
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Hall, Jocelyn C.
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Hao, Yue
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Hendriks, Kasper P
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Hibberd, Julian M.
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King, Graham J.
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Kliebenstein, Daniel J.
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Koch, Marcus A.
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Leitch, Ilia J
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Lens, Frederic
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Lysak, Martin A
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McAlvay, Alex C.
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McKibben, Michael T. W.
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Mercati, Francesco
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Moore, Richard C.
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Mummenhoff, Klaus
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Murphy, Daniel J.
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Nikolov, Lachezar A.
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Pisias, Michael
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Roalson, Eric H.
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Schranz, M. Eric
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Thomas, Shawn K.
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Yu, Qingyi
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Yocca, Alan
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Pires, J. Chris
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Harkess, Alex E.
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Date published
October 12, 2023
Abstract
Model species continue to underpin groundbreaking plant science research. At the same time, the phylogenetic resolution of the land plant Tree of Life continues to improve. The intersection of these two research paths creates a unique opportunity to further extend the usefulness of model species across larger taxonomic groups. Here we promote the utility of the Arabidopsis thaliana model species, especially the ability to connect its genetic and functional resources, to species across the entire Brassicales order. We focus on the utility of using genomics and phylogenomics to bridge the evolution and diversification of several traits across the Brassicales to the resources in Arabidopsis, thereby extending scope from a model species by establishing a “model clade”. These Brassicales-wide traits are discussed in the context of both the model species Arabidopsis thaliana and the family Brassicaceae. We promote the utility of such a “model clade” and make suggestions for building global networks to support future studies in the model order Brassicales.
Funder
Funder nameAwards
National Science Foundation, United States
NSF-BSF-IOS-EDGE
United States - Israel Binational Science Foundation, Israel
1923589/2019610
The Goldinger Trust Jewish Fund for the Future
U.S. Department of Energy, United States
BER-DE-SC0020358
Journal title
The Plant Cell
Article number
koad260
Publisher
Oxford University Press (OUP)
Place of publication
Oxford, UK
ISSN
1040-4651
eISSN
1532-298X
Date accepted
September 22, 2023
Official URL
https://doi.org/10.1093/plcell/koad260
Rights statement
In Copyright
Licence
https://creativecommons.org/licenses/by-nc-nd/4.0/
DOI
10.1093/plcell/koad260
Keywords
Genomics
Tree of Life
Phylogenomics
Model species
Arabidopsis thaliana model species
Model clades
Brassicales
Species models
Additional information
IF = 12.085 (2022-2023)
Managed by the British Library and supported by the AHRC

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