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  5. Next‐generation specimen digitization: capturing reflectance spectra from the world's herbaria for modeling plant biology across time, space, and taxa.

Next‐generation specimen digitization: capturing reflectance spectra from the world's herbaria for modeling plant biology across time, space, and taxa.

Resource type
Journal article
Creator (person)
Cavender‐Bares, Jeannine
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White, Dawson M.
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Ahlstrand, Natalie Iwanycki
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Austin, Matthew W.
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Bastianelli, Denis
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more
Date published
October 31, 2025
Abstract

Spectral reflectance measured from herbarium specimens represents a potentially vast source of information relevant to plant taxon identification and functional traits, which has inspired many laboratories world‐wide to initiate next‐generation spectral digitization from specimens. Combining these datasets into a coordinated global database would generate new capacity to model plant traits globally, enabling connection with remote sensing and ecological and biosphere models, as well as reconstruction of trait evolution. However, coordination is needed to avoid downstream problems in data aggregation due to variation in data standards and technical specifications of the instruments, optical setups, or measurement protocols. The International Herbarium Spectral Digitization (IHerbSpec) working group has initiated a globally collaborative program, outlining the central issues to address in establishing protocols, standards, and best practices, and proposing next steps. This collaborative effort will allow generation of replicable spectral reflectance data from plant specimens housed in herbaria around the world within ongoing digitization programs following community‐defined standards and Findable, Accessible, Interoperable, and Reusable (FAIR) principles.

Organisational unit
Science
Project(s)
Priority 4: Accelerated Taxonomy
Funder
Funder nameISNIAwards
European Research Council, European Union
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Grant agreement no. 865787
National Science Foundation, United States
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DBI-2027654 - DBI-1930007 - ASCEND, Advancing Spectral biology in Changing Environments to understand plant Diversity (DBI: 2021898)
Fundação de Amparo à Pesquisa do Estado do Amazonas, Brazil
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006/2024
Missouri Botanical Garden, United States
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Revolutionizing Species Identification project
Natural Sciences and Engineering Research Council of Canada, Canada
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NSERC Discovery Grant
Herbaria, Harvard University, United States
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Journal title
New Phytologist
Volume
251
Issue
2
Pagination
645-665
Publisher
Wiley
Place of publication
UK
ISSN
0028-646X
eISSN
1469-8137
Date accepted
September 6, 2025
Official URL
https://doi.org/10.1111/nph.70645
Rights statement
In Copyright
DOI
10.1111/nph.70645
Keywords
Methodological standards
Next-generation digitization
Plant functional traits
Collection management
Spectral reflectance
Global herbarium
Additional information
IF = 8.7 (2025)
Managed by the British Library and supported by the AHRC

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