Systemic analysis of lipid metabolism from individuals to multi-organism systems.
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Resource type
Journal article
Creator (person)
Furse, Samuel
Martel, Carlos
Willer, David F.
Stabler, Daniel
Fernandez-Twinn, Denise S.
Scott, Jennifer
Patterson-Cross, Ryan
Watkins, Adam J.
Virtue, Samuel
Prescott, Thomas A. K.
Baker, Ellen
Chennells, Jennifer
Vidal-Puig, Antonio
Ozanne, Susan E.
Kite, Geoffrey C.
Vítová, Milada
Chiarugi, Davide
Moncur, John
Koulman, Albert
Wright, Geraldine A.
Snowden, Stuart G.
Stevenson, Philip C.
Date published
September 9, 2024
Abstract
Complete pipeline for system-level of biological systems, from indivituals to ecosystems, using only metabolite data.
Lipid metabolism is recognised as being central to growth, disease and health. Lipids, therefore, have an important place in current research on globally significant topics such as food security and biodiversity loss. However, answering questions in these important fields of research requires not only identification and measurement of lipids in a wider variety of sample types than ever before, but also hypothesis-driven analysis of the resulting ‘big data’. We present a novel pipeline that can collect data from a wide range of biological sample types, taking 1 000 000 lipid measurements per 384 well plate, and analyse the data systemically. We provide evidence of the power of the tool through proof-of-principle studies using edible fish (mackerel, bream, seabass) and colonies of . Bee colonies were found to be more like mini-ecosystems and there was evidence for considerable changes in lipid metabolism in bees through key developmental stages. This is the first report of either high throughput LCMS lipidomics or systemic analysis in individuals, colonies and ecosystems. This novel approach provides new opportunities to analyse metabolic systems at different scales at a level of detail not previously feasible, to answer research questions about societally important topics.
Project(s)
Priority 2: Trait Diversity and Function
Funder
| Funder name | Awards |
Medical Research Council, United Kingdom | MC_UU_00014/4 |
Biotechnology and Biological Sciences Research Council, United Kingdom | BB/T015292/1 - BB/R003556/1 |
Natural Environment Research Council, United Kingdom | NE/V012282/1 |
Akademie Věd České Republiky, Czechia | RVO 67985939 |
Cambridge Philosophical Society, United Kingdom | Henslow Fellowship at Murray Edwards College, Cambridge |
Journal title
Molecular Omics
Publisher
Royal Society of Chemistry (RSC)
Place of publication
Cambridge, UK
eISSN
2515-4184
Date accepted
August 30, 2024
Official URL
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Rights statement
In Copyright
Additional information
IF = 2.96 (2023-2024)