The genome sequence of the corn cockle, Agrostemma githago L., 1753 (Caryophyllaceae) [version 1; peer review: 1 approved, 1 approved with reservations].
Name
b399569c-afa9-47d2-aab6-f45df1c10a9d_23128_-_tree_of_life_team_sanger.pdf
Description
visibility:open
Size
3.41 MB
Format
Adobe PDF
Checksum (CRC64NVME)
kp1qwWV6CZI=
Resource type
Journal article
Date published
October 15, 2024
Abstract
We present a genome assembly from an individual (the corn cockle; Tracheophyta; Magnoliopsida; Caryophyllales; Caryophyllaceae). The genome sequence has a total length of 1,735.0 megabases. Most of the assembly is scaffolded into 24 chromosomal pseudomolecules suggesting the individual is a tetraploid (2 = 4 = 48). The organelle genomes have been assembled, and the length of the mitochondrial genome is 262.91 and the plastid genome 151.73 kilobases in length. Gene annotation of this assembly on Ensembl identified 38,816 protein-coding genes.
Creator (organisation)
Royal Botanic Gardens Kew Genome Acquisition Lab, United Kingdom
Plant Genome Sizing collective
Darwin Tree of Life Barcoding collective
Wellcome Sanger Institute Tree of Life Management, Samples and Laboratory team
Wellcome Sanger Institute Scientific Operations: Sequencing Operations
Wellcome Sanger Institute Tree of Life Core Informatics team
Tree of Life Core Informatics collective
Darwin Tree of Life Consortium
Project(s)
Priority 2: Trait Diversity and Function
Priority 1: Ecosystem Stewardship
Funder
| Funder name | Awards |
Wellcome Trust< United Kingdom | 206194 - 218328 |
Journal title
Wellcome Open Research
Volume
8
Article number
590
Publisher
Wellcome Trust
Place of publication
London, UK
eISSN
2398-502X
Date accepted
October 19, 2024
Official URL
Rights statement
In Copyright
Keywords
Additional information
IF = 1.777 (2022-2023)
Collection