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  5. PROTAX-fungi: a web-based tool for probabilistic taxonomic placement of fungal internal transcribed spacer sequences.

PROTAX-fungi: a web-based tool for probabilistic taxonomic placement of fungal internal transcribed spacer sequences.

Resource type
Journal article
Creator (person)
Abarenkov, Kessy
ORCIDORCID logo
Somervuo, Panu
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Nilsson, R. Henrik
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Kirk, Paul M.
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Huotari, Tea
Abrego, Nerea
ORCIDORCID logo
Ovaskainen, Otso
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Date published
October 2018
Creator (organisation)
Abarenkov, Kessy
Somervuo, Panu
Nilsson, R. Henrik
Kirk, Paul M.
Huotari, Tea
Abrego, Nerea
Ovaskainen, Otso
Funder
Funder nameAwards
Academy of Finland, Finland
Grant no. 284601 - Grant no. 1273253 - Grant no. 250444
Norges Forskningsråd, Norway
Grant no. 223257
Eesti Teadusagentuur, Estonia
Grant no. IUT20-30
European Regional Development Fund, European Union
Alfred P. Sloan Foundation, United States
Journal title
New Phytologist
Volume
220
Issue
2
Publisher
Wiley
Place of publication
UK
ISSN
0028-646X
eISSN
1469-8137
Date accepted
May 30, 2018
Official URL
https://doi.org/10.1111/nph.15301
Rights statement
In Copyright
DOI
10.1111/nph.15301
Keywords
Data quality
internal transcribed spacer (ITS)
Molecular species identification
Fungi
Annotation
Identification tool
Environmental sequencing
Probabilistic taxonomic assignment
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