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  5. Towards a new online species-information system for legumes

Towards a new online species-information system for legumes

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Resource type
Journal article
Creator (person)
Bruneau, Anne
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Borges, Leonardo M.
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Allkin, Robert
Egan, Ashley N.
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de la Estrella, Manuel
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Javadi, Firouzeh
Klitgaard, Bente
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Miller, Joseph T.
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Murphy, Daniel J.
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Sinou, Carole
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Vatanparast, Mohammad
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Zhang, Rong
Date published
October 1, 2019
Abstract
The need for scientists to exchange, share and organise data has resulted in a proliferation of biodiversity research-data portals over recent decades. These cyber-infrastructures have had a major impact on taxonomy and helped the discipline by allowing faster access to bibliographic information, biological and nomenclatural data, and specimen information. Several specialised portals aggregate particular data types for a large number of species, including legumes. Here, we argue that, despite access to such data-aggregation portals, a taxon-focused portal, curated by a community of researchers specialising on a particular taxonomic group and who have the interest, commitment, existing collaborative links, and knowledge necessary to ensure data quality, would be a useful resource in itself and make important contributions to more general data providers. Such an online species-information system focused on Leguminosae (Fabaceae) would serve useful functions in parallel to and different from international data-aggregation portals. We explore best practices for developing a legume-focused portal that would support data sharing, provide a better understanding of what data are available, missing, or erroneous, and, ultimately, facilitate cross-analyses and direct development of novel research. We present a history of legume-focused portals, survey existing data portals to evaluate what is available and which features are of most interest, and discuss how a legume-focused portal might be developed to respond to the needs of the legume-systematics research community and beyond. We propose taking full advantage of existing data sources, informatics tools and protocols to develop a scalable and interactive portal that will be used, contributed to, and fully supported by the legume-systematics community in the easiest manner possible.
Journal title
Australian Systematic Botany
Volume
32
Issue
6
Publisher
CSIRO Publishing
ISSN
1030-1887
Official URL
https://www.publish.csiro.au/sb/SB19025
Rights statement
In Copyright
Licence
https://creativecommons.org/licenses/by-nc-nd/4.0/
DOI
10.1071/sb19025
Keywords
nomenclature
specialist data curation
occurrence data
trait data
taxonomic backbone
phylogenetic data
data exchange
genetic data
data standards
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