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Journal article
Complementing model species with model clades.
Model species continue to underpin groundbreaking plant science research. At the same time, the phylogenetic resolution of the land plant Tree of Life continues to improve. The intersection of these two research paths creates a unique opportunity to further extend the usefulness of model species across larger taxonomic groups. Here... -
Journal article
Genomic, spatial and morphometric data for discrimination of four species in the Mediterranean Tamus clade of yams (Dioscorea, Dioscoreaceae).
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Journal article
Tapping culture collections for fungal endophytes: first genome assemblies for three genera and five species in the Ascomycota.
The Ascomycota form the largest phylum in the fungal kingdom and show a wide diversity of lifestyles, some involving associations with plants. Genomic data is available for many ascomycetes that are pathogenic to plants, but endophytes, which are asymptomatic inhabitants of plants, are relatively understudied. Here, using short- and long-read...Hill, Rowena ; Levicky, Quentin ; Pitsillides, Frances ; Junnonen, Amy ; Arrigoni, Elena …
Cytometric completeness, Ascomycota, Culture collections, and Fungal endophytes
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Journal article
Genome resources for underutilised legume crops: genome sizes, genome skimming and marker development.
Underutilised crops suffer from under-investigation relative to more mainstream crops, but often possess improved stress tolerance and/or nutrition, making them potentially important for breeding programmes in the context of climate change and an expanding human population. Developing basic genome resources for underutilised crops may therefore catalyse analyses to facilitate their... -
Journal article
Genetic factors predict hybrid formation in the British flora.
Natural hybridization can have a profound evolutionary impact, with consequences ranging from the extinction of rare taxa to the origin of new species. Natural hybridization is particularly common in plants; however, our understanding of the general factors that promote or prevent hybridization is hampered by the highly variable outcomes in...Brown, Max R. ; Hollingsworth, Peter M. ; Forrest, Laura L. ; Hart, Michelle L. ; Leitch, Ilia J. …
Floristic, Great Britain, Genetic distance, Hybrid, Floras, and DNA barcoding
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Journal article
First Whole Genome Sequence and Flow Cytometry Genome Size Data for the Lichen-Forming Fungus Ramalina farinacea (Ascomycota).
Lichen-forming fungi are a diverse and ecologically important group of obligate mutualistic symbionts. Due to difficulties with maintaining them in culture and their extremely slow growth, lichenologists are increasingly opting for metagenomic sequencing followed by symbiont genome separation using bioinformatic pipelines. However, without knowing the true genome size of the...Llewellyn, Theo ; Mian, Sahr ; Hill, Rowena ; Leitch, Ilia J ; Gaya, Ester
Lichen, Genome size, Ramalina farinacea, Symbiosis, Ramalinaceae, Long-read sequencing, and Metagenomics
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Journal article
Let’s pluck the daisy: dissection as a tool to explore the diversity of Asteraceae capitula.
Asteraceae, the daisy family, are one of the most diverse families of angiosperms and are predominant in many ecosystems, including grasslands, deserts, savannas and high-elevation mountains. They are characterized by a peculiar inflorescence, the capitulum, which mimics a flower, but is actually made up of many tightly grouped florets. The...Fu, Lin ; Palazzesi, Luis ; Pellicer, Jaume ; Balant, Manica ; Christenhusz, Maarten J M …
Compositae, Asteraceae, Pseudanthium, Inflorescence, Dissection, Synflorescences, and Capitulum
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Journal article
Phylogenomic analyses of Sapindales support new family relationships, rapid Mid-Cretaceous Hothouse diversification, and heterogeneous histories of gene duplication.
Sapindales is an angiosperm order of high economic and ecological value comprising nine families, c. 479 genera, and c. 6570 species. However, family and subfamily relationships in Sapindales remain unclear, making reconstruction of the order’s spatio-temporal and morphological evolution difficult. In this study, we used Angiosperms353 target capture data to... -
Journal article
Giant Fern Genomes Show Complex Evolution Patterns: A Comparative Analysis in Two Species of Tmesipteris (Psilotaceae).
Giant genomes are rare across the plant kingdom and their study has focused almost exclusively on angiosperms and gymnosperms. The scarce genetic data that are available for ferns, however, indicate differences in their genome organization and a lower dynamism compared to other plant groups. Tmesipteris is a small genus of...