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Displaying 1 - 8 of 8 total results.

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Filtering by: Keyword Target sequence capture Remove constraint Keyword: Target sequence capture

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2022

Journal article

A Comprehensive Phylogenomic Platform for Exploring the Angiosperm Tree of Life.

The tree of life is the fundamental biological roadmap for navigating the evolution and properties of life on Earth, and yet remains largely unknown. Even angiosperms (flowering plants) are fraught with data gaps, despite their critical role in sustaining terrestrial life. Today, high-throughput sequencing promises to significantly deepen our understanding...

Baker, William J. ; Bailey, Paul ; Barber, Vanessa ; Barker, Abigail ; Bellot, Sidonie …
Kew Tree of Life Explorer, Target sequence capture, Nuclear phylogenomics, Herbariomics, Tree of life, Open access, DNA sequences, Genomics, Plant and Fungal Trees of Life project, Phylogenomics, DNA barcode, Angiosperms, Angiosperms353, and Museomics
2022

Journal article

Phylogenomics and generic limits of Dypsidinae (Arecaceae), the largest palm radiation in Madagascar.

Eiserhardt, Wolf L. ; Bellot, Sidonie ; Cowan, Robyn S. ; Dransfield, John ; Hansen, Lars Emil S.F. …
Target sequence capture, Madagascar, Hyb-Seq, Dypsis, Phylogeny, Chrysalidocarpus, and Palmae
2022

Journal article

Phylogenetic Relationships Within the Hyper-Diverse Genus Eugenia (Myrtaceae: Myrteae) Based on Target Enrichment Sequencing.

is one of the most taxonomically challenging lineages of flowering plants, in which morphological delimitation has changed over the last few years resulting from recent phylogenetic study based on molecular data. Efforts, until now, have been limited to Sanger sequencing of mostly plastid markers. These phylogenetic studies indicate 11 clades...

Giaretta, Augusto ; Murphy, Bruce ; Maurin, Olivier ; Mazine, Fiorella F. ; Sano, Paulo …
Target sequence capture, Myrtaceae, Eugenia, Phylogenomics, Hyb-Seq, and High-throughput sequencing
2021

Journal article

A bioinformatic platform to integrate target capture and whole genome sequences of various read depths for phylogenomics.

Ribeiro, Pedro G. ; Torres Jiménez, María Fernanda ; Andermann, Tobias ; Antonelli, Alexandre ; Bacon, Christine D. …
De novo assembly, Target sequence capture, secapr , Low-coverage whole genome sequencing, and Loci extraction
2021

Journal article

A comprehensive phylogenomic study of the monocot order Commelinales, with a new classification of Commelinaceae

Zuntini, Alexandre R. ; Frankel, Lorna P. ; Pokorny, Lisa ; Forest, Félix ; Baker, William J.
Angiosperms353 , Hyb-Seq , Herbariomics , Plastomes , Shallow skimming , Single-copy nuclear markers , Target sequence capture, and Commelinid monocots herbariomics Hyb-Seq plastomes shallow skimming single-copy nuclear markers target sequence capture
2021

Journal article

A higher-level nuclear phylogenomic study of the carrot family (Apiaceae).

Clarkson, James J. ; Zuntini, Alexandre R. ; Maurin, Olivier ; Downie, Stephen R. ; Plunkett, Gregory M. …
Tree of life , Angiosperms353 , Apiales, Umbelliferae, Target sequence capture, and Molecular phylogenetics
2021

Journal article

Settling a family feud: A high-level phylogenomic framework for the gentianales based on 353 nuclear genes and partial plastomes.

Antonelli, Alexandre ; Clarkson, James J. ; Kainulainen, Kent ; Maurin, Olivier ; Brewer, Grace E. …
Target sequence capture, Molecular phylogenetics, Tree of life, Asterids, Angiosperms353, Museomics, and Hyb- Seq
2021

Journal article

Genomic and niche divergence in an Amazonian palm complex.

Bacon, Christine D. ; Roncal, Julissa ; Andermann, Tobias ; Barnes, CHristopher J. ; Balslev, Henrik …
Target sequence capture, Soil,, Morphometrics, Habitat differentiation, Ecological divergence, Climate, Arecaceae, Pre-zygotic reproductive barriers, Coalescence, and Pollinators

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Type

Article8

Resource Type

Journal article8

Creator

Baker, William J.5
Antonelli, Alexandre3
Clarkson, James J.3
Epitawalage, Niroshini3
Forest, Félix3
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Keyword

Target sequence capture[remove]8
Angiosperms3532
Angiosperms353 2
Hyb-Seq2
Museomics2
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Language

English8

Collection

Plant and Fungal Tree of Life project4

Institution

Royal Botanic Gardens, Kew Research Repository8

Availability

File publicly available8

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