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Journal article
Plastid phylogenomics of Pleurothallidinae (Orchidaceae): Conservative plastomes, new variable markers, and comparative analyses of plastid, nuclear, and mitochondrial data.
We present the first comparative plastome study of Pleurothallidinae with analyses of structural and molecular characteristics and identification of the ten most-variable regions to be incorporated in future phylogenetic studies. We sequenced complete plastomes of eight species in the subtribe and compared phylogenetic results of these to parallel analyses of... -
Journal article
Evolutionary history of CAM photosynthesis in Neotropical Clusia : insights from genomics, anatomy, physiology and climate.
Clusia is a remarkable genus of Neotropical woody plants as its members engage in either C3 photosynthesis or employ, to varying degrees, crassulacean acid metabolism (CAM) photosynthesis. Information about the evolutionary history of CAM in Clusia is scarce. Restriction site-associated sequencing of 64 species (20% of the genus) provided strong... -
Journal article
Justicieae II: Resolved Placement of Many Genera and Recognition of a New Lineage Sister to Isoglossinae.
We present phylogenetic results for Justicieae, the largest of the major lineages of Acanthaceae. With 300% more sequence data and a similarly increased but also more geographically representative taxon sample compared to the only previous study of the lineage as a whole, we confirm the existence of the Pseuderanthemum Lineage,...McDade, Lucinda A. ; Kiel, Carrie A. ; Daniel, Thomas F. ; Darbyshire, Iain
Lineages, Phylogenetics, Sequence data, Justicieae, Acanthaceae, Pollen morphology, Asia, and Madagascar
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Master's dissertation
Phylogenetics and phylogeography of blue Entoloma.
Elsey, Jacob
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