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Filtering by: Keyword Phylogenetic congruence

2023

Journal article

Rtapas: An R package to assess cophylogenetic signal between two evolutionary histories.

Cophylogeny represents a framework to understand how ecological and evolutionary process influence lineage diversification. The recently developed algorithm Random Tanglegram Partitions provides a directly interpretable statistic to quantify the strength of cophylogenetic signal and incorporates phylogenetic uncertainty into its estimation, and maps onto a tanglegram the contribution to cophylogenetic signal...

Llaberia-Robledillo, Mar ; Lucas-Lledó, J. Ignacio ; Pérez-Escobar, Oscar A. ; Krasnov, Boris R ; Balbuena, Juan Antonio
Phylogenomics, Random Tanglegram Partitions, Cophylogeny, Gene tree incongruence, Cophylogenetic signal, Rtapas, and Phylogenetic congruence
2022

Journal article

Mitochondrial genomic data are effective at placing mycoheterotrophic lineages in plant phylogeny.

Lin, Qianshi ; Braukmann, Thomas W. A. ; Soto Gomez, Marybel ; Mayer, Juliana Lischka Sampaio ; Pinheiro, Fábio …
Mitogenomes, Dioscoreales, Afrothismia, Ericales, RNA editing, Angiosperm phylogenomics, Core Thismiaceae, and Phylogenetic congruence