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Journal article
The genome sequence of the oyster mushroom, Pleurotus ostreatus ((Jacq.) P. Kummer, 1871).
We present a genome assembly from a specimen (the oyster mushroom; Basidiomycota; Agaricomycetes; Agaricales; Pleurotaceae). The genome sequence is 40.6 megabases in span. Most of the assembly is scaffolded into 12 chromosomal pseudomolecules. Two mitochondrial genomes have been assembled, which are 73.1 and 9.3 kilobases in length. -
Journal article
Phylogeny, taxonomy, and character evolution in Entoloma subgenus Nolanea.
is a well-known and long-established subgenus of the genus traditionally defined mainly by the mycenoid basidiocarps of the included species. Until now, revisions of this subgenus including molecular data exist only on a regional scale. In this study, the phylogeny of species of is analysed based on multi-gene DNA sequences... -
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Journal article
Cortinarius ochrolamellatus (Agaricales, Basidiomycota): a new species in C. sect. Laeti, with comments on the origin of its European-Hyrcanian distribution.
Geographic distributions of mushroom-forming fungi usually remain elusive because of the scarcity of occurrence data. However, the increasing number of environmental and ectomycorrhizal (EcM) root tip DNA sequences deposited in public repositories provides a unique opportunity to expand our knowledge about fungal geographic distributions, even at the intercontinental scale. Here,... -
Journal article
Taming the beast: a revised classification of Cortinariaceae based on genomic data.
Family currently includes only one genus, , which is the largest genus, with thousands of species worldwide. The species are important ectomycorrhizal fungi and form associations with many vascular plant genera from tropicals to arctic regions. Genus contains a lot of morphological variation, and its complexity has led many taxonomists...Liimatainen, Kare ; Kim, Jan T. ; Pokorny, Lisa ; Kirk, Paul M. ; Dentinger, Bryn …
HybPiper, Fungariomics, Fungi, Whole genome sequencing, Agaricales, and Museomics
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Journal article
Cortinarius subgenus Leprocybe, unexpected diversity and significant differences in species compositions between western and eastern North America.
The focus of this paper is the North American species of in subg. . Eighteen species, including twelve new ones, and two tentative (aff.) species, are delimited based on morphological and molecular data (DNA ITS-LSU sequences). Existing type specimens of species in subg. were also studied, and neo- or epitypes...Ammirati, J. ; Liimatainen, K. ; Bojantchev, D. ; Peintner, U. ; Kuhnert-Finkernagel, R. …
North America, Cortinariaceae, Agaricales, Barcodes, Ectomycorrhiza, Europe, and ITS
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Journal article
Tales from the crypt: genome mining from fungarium specimens improves resolution of the mushroom tree of life.
Dentinger, Bryn T. M. ; Gaya, Ester ; O'Brien, Heath ; Suz, Laura M. ; Lachlan, Robert …
Phylogenetic informativeness, Orthologue, Agaricales, Evolution, Vouchers, and Phylogenomics
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Journal article
Cortinarius section Thaumasti in South American Nothofagaceae forests
We studied the South American species of Cortinarius section Thaumasti based on morphological and molecular data. Members of this group can easily be identified in the field because the basidiomata are small and Phlegmacium-like with a bulbous stipe and the universal veil in most species forms a distinct volva at...