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2018
Journal article
Earth BioGenome Project: Sequencing life for the future of life
Increasing our understanding of Earth’s biodiversity and responsibly stewarding its resources are among the most crucial scientific and social challenges of the new millennium. These challenges require fundamental new knowledge of the organization, evolution, functions, and interactions among millions of the planet’s organisms. Herein, we present a perspective on the...Lewin, Harris A. ; Robinson, Gene E. ; Kress, W. John ; Baker, William J. ; Coddington, Jonathan …
genome sequencing, data science, biodiversity, genomics, and access and benefit sharing
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2018
Journal article
A Universal Probe Set for Targeted Sequencing of 353 Nuclear Genes from Any Flowering Plant Designed Using k-Medoids Clustering
Sequencing of target-enriched libraries is an efficient and cost-effective method for obtaining DNA sequence data from hundreds of nuclear loci for phylogeny reconstruction. Much of the cost of developing targeted sequencing approaches is associated with the generation of preliminary data needed for the identification of orthologous loci for probe design.... -
2009
Journal article
An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG III.
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2022
Journal article
Standards recommendations for the Earth BioGenome Project.
A global international initiative, such as the Earth BioGenome Project (EBP), requires both agreement and coordination on standards to ensure that the collective effort generates rapid progress toward its goals. To this end, the EBP initiated five technical standards committees comprising volunteer members from the global genomics scientific community: Sample...Lawniczak, Mara K. N. ; Durbin, Richard ; Flicek, Paul ; Lindblad-Toh, Kerstin ; Wei, Xiaofeng …
Earth BioGenome Project, Ethics, Genomics, and Genome assembly
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2023
Journal article
The phylogeny and global biogeography of Primulaceae based on high-throughput DNA sequence data.
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2023
Abstract
Connecting the Dots: Aligning human capacity through networks toward a globally interoperable Digital Extended Specimen (DES) infrastructure.
Thanks to substantial support for biodiversity data mobilization in recent decades, billions of occurrence records are openly available, documenting life on Earth and enabling timely research, awareness raising, and policy-making. Initiatives across local to global scales have been separately funded to serve different, yet often overlapping audiences of data users,...Ellwood, Elizabeth R. ; Addink, Wouter ; Bates, John ; Bentley, Andrew ; Buschbom, Jutta …
Collaboration, Biodiversity, Digital Extended Specimen (DES), International partners, and Roadmap