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2023
Journal article
Giant Fern Genomes Show Complex Evolution Patterns: A Comparative Analysis in Two Species of Tmesipteris (Psilotaceae).
Giant genomes are rare across the plant kingdom and their study has focused almost exclusively on angiosperms and gymnosperms. The scarce genetic data that are available for ferns, however, indicate differences in their genome organization and a lower dynamism compared to other plant groups. Tmesipteris is a small genus of... -
2022
Journal article
Asteraceae as a model system for evolutionary studies: from fossils to genomes.
With c. 24 700 species (10% of all flowering plants), Asteraceae are one of the largest and most phenotypically diverse angiosperm families, with considerable economic and ecological importance. Asteraceae are distributed worldwide, from nearly polar latitudes all the way to the tropics, and occur across a diverse range of habitats...Palazzesi, Luis ; Pellicer, Jaume ; Barreda, Viviana D ; Loeuille, Benoît ; Mandel, Jennifer R …
Phylogenomics, Fossil record, Biogeography, Asteraceae, Evolution, Compositae, and Genome size
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2022
Journal article
A Comprehensive Phylogenomic Platform for Exploring the Angiosperm Tree of Life.
The tree of life is the fundamental biological roadmap for navigating the evolution and properties of life on Earth, and yet remains largely unknown. Even angiosperms (flowering plants) are fraught with data gaps, despite their critical role in sustaining terrestrial life. Today, high-throughput sequencing promises to significantly deepen our understanding... -
2022
Journal article
Taming the beast: a revised classification of Cortinariaceae based on genomic data.
Family currently includes only one genus, , which is the largest genus, with thousands of species worldwide. The species are important ectomycorrhizal fungi and form associations with many vascular plant genera from tropicals to arctic regions. Genus contains a lot of morphological variation, and its complexity has led many taxonomists...Liimatainen, Kare ; Kim, Jan T. ; Pokorny, Lisa ; Kirk, Paul M. ; Dentinger, Bryn …
HybPiper, Fungariomics, Fungi, Whole genome sequencing, Agaricales, and Museomics
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2021
Journal article
Lineage‐specific vs. universal: A comparison of the Compositae1061 and Angiosperms353 enrichment panels in the sunflower family.
Siniscalchi, Carolina M. ; Hidalgo, Oriane ; Palazzesi, Luis ; Pellicer, Jaume ; Pokorny, Lisa …
Target capture, Paralogy , Asteraceae , Angiosperms, and Phylogenomics
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2021
Journal article
A comprehensive phylogenomic study of the monocot order Commelinales, with a new classification of Commelinaceae
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2021
Journal article
Comprehending Cornales: phylogenetic reconstruction of the order using the Angiosperms353 probe set.