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Search Results
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Journal article
A benchmark dataset of herbarium specimen images with label data
More and more herbaria are digitising their collections. Images of specimens are made available online to facilitate access to them and allow extraction of information from them. Transcription of the data written on specimens is critical for general discoverability and enables incorporation into large aggregated research datasets. Different methods, such...Dillen, Mathias ; Groom, Quentin ; Chagnoux, Simon ; Güntsch, Anton ; Hardisty, Alex …
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Journal article
Enhancement of conservation knowledge through increased access to botanical information
Herbarium specimens are increasingly recognized as an important resource for conservation science and virtual herbaria are making specimens freely available to a wider range of users than ever before. Few virtual herbaria are designed with conservation use as a primary driver. Exceptionally, Brazil's Reflora Virtual Herbarium (RVH) was created to...Canteiro, Cátia ; Barcelos, Laísa ; Filardi, Fabiana ; Forzza, Rafaela ; Green, Laura …
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Journal article
Improved standardization of transcribed digital specimen data
There are more than 1.2 billion biological specimens in the world’s museums and herbaria. These objects are particularly important forms of biological sample and observation. They underpin biological taxonomy but the data they contain have many other uses in the biological and environmental sciences. Nevertheless, from their conception they are almost... -
Journal article
A cost analysis of transcription systems
We compare different approaches to transcribing natural history data and summarise the advantages and disadvantages of each approach using six case studies from four different natural history collections. We summarise the main cost considerations when planning a transcription project and discuss the limitations we current have in understanding the costs... -
Journal article
Quality issues in georeferencing: From physical collections to digital data repositories for ecological research
Natural history collections constitute an enormous wealth of information of Life on Earth. It is estimated that over 2 billion specimens are preserved at institutions worldwide, of which less than 10% are accessible via biodiversity data aggregators such as GBIF. Moreover, they are a very important resource for eco‐evolutionary research,... -
Research report
SYNTHESYS+ Virtual Access - Report on the Ideas Call (October to November 2019)
The SYNTHESYS consortium has been operational since 2004, and has facilitated physical access by individual researchers to European natural history collections through its Transnational Access programme (TA). For the first time, SYNTHESYS+ will be offering virtual access to collections through digitisation, with two calls for the programme, the first in...Hardy, Helen ; Knapp, Sandra ; Allan, E. Louise ; Berger, Frederik ; Dixey, Katherine …
virtual data, digitisation, digitization, digital data, access, collaboration, and natural history collections
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Research report
Updating data standards in transcription
There are more than 1.2 billion biological specimens in the world’s museums and herbaria. These objects are a particularly important form of biological sample and observation. They underpin biological taxonomy, but the data they contain have many other uses in the biological and environmental sciences. Nevertheless, from their conception they...Groom, Quentin ; Dillen, Mathias ; Hardy, Helen ; Phillips, Sarah ; Willemse, Luc
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Conference paper (published)
Specimens as Research Objects: Reconciliation Across Distributed Repositories to Enable Metadata Propagation
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Abstract
Progress in Authority Management of People Names for Collections.
The concept of building a network of relationships between entities, a knowledge graph, is one of the most effective methods to understand the relations between data. By organizing data, we facilitate the discovery of complex patterns not otherwise evident in the raw data. Each datum at the nodes of a...Groom, Quentin ; Besombes, Chloé ; Brown, Josh ; Chagnoux, Simon ; Georgiev, Teodor …