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2023
Journal article
First Whole Genome Sequence and Flow Cytometry Genome Size Data for the Lichen-Forming Fungus Ramalina farinacea (Ascomycota).
Lichen-forming fungi are a diverse and ecologically important group of obligate mutualistic symbionts. Due to difficulties with maintaining them in culture and their extremely slow growth, lichenologists are increasingly opting for metagenomic sequencing followed by symbiont genome separation using bioinformatic pipelines. However, without knowing the true genome size of the...Llewellyn, Theo ; Mian, Sahr ; Hill, Rowena ; Leitch, Ilia J ; Gaya, Ester
Lichen, Genome size, Ramalina farinacea, Symbiosis, Ramalinaceae, Long-read sequencing, and Metagenomics
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2023
Journal article
A highly contiguous genome assembly reveals sources of genomic novelty in the symbiotic fungus Rhizophagus irregularis.
The root systems of most plant species are aided by the soil foraging capacities of symbiotic Arbuscular Mycorrhizal (AM) fungi of the Glomeromycotina subphylum. Despite recent advances in our knowledge of the ecology and molecular biology of this mutualistic symbiosis, our understanding of the AM fungi genome biology is just... -
2023
Journal article
Metagenomics Shines Light on the Evolution of ‘Sunscreen’ Pigment Metabolism in the Teloschistales (Lichen-Forming Ascomycota).
Fungi produce a vast number of secondary metabolites that shape their interactions with other organisms and the environment. Characterising the genes underpinning metabolite synthesis is therefore key to understanding fungal evolution and adaptation. Lichenised fungi represent almost one-third of Ascomycota diversity and boast impressive secondary metabolites repertoires. However, most lichen... -
2021
Journal article
Seed Banks as Incidental Fungi Banks: Fungal Endophyte Diversity in Stored Seeds of Banana Wild Relatives.
Hill, Rowena ; Llewellyn, Theo ; Downes, Elizabeth ; Oddy, Joseph ; MacIntosh, Catriona …
Endophytic fungi, Musa, Banana, Seed banking, Fusarium, Crop wild relatives, and Seed mycobiome
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2019
Master's dissertation
Revisiting generic concepts in the Teloschistaceae (lichenforming Ascomycota) using molecular phylogenetics, algorithmic taxa delimitation and molecular networks
In systematics, genera delimitation is constantly changing as taxonomic units above species level are not standardised. The Teloschistaceae, a diverse family of lichenised fungi, represents an extreme example of this where the number of genera has increased tenfold in the last decade. Many of these genera are based solely on...Llewellyn, Theo