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Search Results
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Journal article
Global access to nomenclatural botanical resources: Evaluating open access availability.
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Abstract
Connecting the Dots: Aligning human capacity through networks toward a globally interoperable Digital Extended Specimen (DES) infrastructure.
Thanks to substantial support for biodiversity data mobilization in recent decades, billions of occurrence records are openly available, documenting life on Earth and enabling timely research, awareness raising, and policy-making. Initiatives across local to global scales have been separately funded to serve different, yet often overlapping audiences of data users,...Ellwood, Elizabeth R. ; Addink, Wouter ; Bates, John ; Bentley, Andrew ; Buschbom, Jutta …
Collaboration, Biodiversity, Digital Extended Specimen (DES), International partners, and Roadmap
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Journal article
Recommendations for interoperability among infrastructures.
The BiCIKL project is born from a vision that biodiversity data are most useful if they are presented as a network of data that can be integrated and viewed from different starting points. BiCIKL’s goal is to realise that vision by linking biodiversity data infrastructures, particularly for literature, molecular sequences,...Meeus, Sofie ; Addink, Wouter ; Agosti, Donat ; Arvanitidis, Christos ; Balech, Bachir …
Hackathon, Wikidata, Biodiversity informatics, Cloud computing, Linking, Data standards, API, and FAIR data
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Journal article
Open science tools: Supporting hands-on creation of the "digital extended specimen".
As a biodiversity informatics community, we have mobilised and interconnected a wide array of information, including specimen collections, published literature and metadata resources, which compile facts about collections and the people that work with them. We have defined data standards to facilitate data interoperability and tools development. Along with colleagues...Nicolson, Nicky ; Lucas, Eve
Document production, Open science, Research tools, Digital specimens, and Record linkage
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Conference paper (published)
Identifying Novel Features from Specimen Data for the Prediction of Valuable Collection Trips.
Primary biodiversity data provide “what, where, and when” data points: the assertion that a species occurred at a particular point in space and time. These are most valuable when associated with specimens stored in natural history museums and herbaria, which evidence the assertions with reference to a physical specimen. The...Nicolson, Nicky ; Tucker, Allan
Collecting trip, Identification, Specimen data, Data-mining, Collectors, and Metadata
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Journal article
People are essential to linking biodiversity data.
People are one of the best known and most stable entities in the biodiversity knowledge graph. The wealth of public information associated with people and the ability to identify them uniquely open up the possibility to make more use of these data in biodiversity science. Person data are almost always...Groom, Quentin ; Güntsch, Anton ; Huybrechts, Pieter ; Kearney, Nicole ; Leachman, Siobhan …
Natural history collections, Specimen data, Biodiversity data, Collectors, and Metadata
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Abstract
Examining Herbarium Specimen Citation: Developing a literature-based institutional impact measure.
Herbarium specimens are critical components of the research process - providing "what, where, when" evidence for species distributions and through type designation, providing the basis for un-ambiguous, standardised nomenclature facilitating the interpretation of scientific names. Specimen references are embedded within research article texts, by convention usually presented in a relatively...Nicolson, Nicky ; Paton, Alan ; Phillips, Sarah ; Tucker, Allan
Text classification, Specimen citation, Text mining, and Citation metrics
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Abstract
Integrating Collector and Author Roles Across Specimen and Publication Datasets.
This work builds on the outputs of a collector data-mining exercise applied to GBIF mobilised herbarium specimen metadata, which uses unsupervised learning (clustering) to identify collectors from minimal metadata associated with field collected specimens (the DarwinCore terms , and ). Here, we outline methods to integrate these data-mined collector entities...Nicolson, Nicky ; Paton, Alan ; Phillips, Sarah ; Tucker, Allan
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Abstract
Progress in Authority Management of People Names for Collections.
The concept of building a network of relationships between entities, a knowledge graph, is one of the most effective methods to understand the relations between data. By organizing data, we facilitate the discovery of complex patterns not otherwise evident in the raw data. Each datum at the nodes of a...Groom, Quentin ; Besombes, Chloé ; Brown, Josh ; Chagnoux, Simon ; Georgiev, Teodor …