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2024
Journal article
The genome sequence of lesser trefoil or Irish shamrock, Trifolium dubium Sibth. (Fabaceae).
We present a genome assembly from an individual (lesser trefoil; Tracheophyta; Magnoliopsida; Fabales; Fabaceae) as part of a collaboration between the Darwin Tree of Life and the European Reference Genome Atlas. The genome sequence is 679.1 megabases in span. Most of the assembly is scaffolded into 15 chromosomal pseudomolecules. The...Ruhsam, Markus ; Hollingsworth, Peter M ; Mc Cartney, Ann M. ; Herron, Katie E. ; Hughes, Graham M. …
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2024
Journal article
The genome sequence of strawberry clover, Trifolium fragiferum L. (Fabaceae).
We present a genome assembly from an individual (strawberry clover; Tracheophyta; Magnoliopsida; Fabales; Fabaceae). The genome sequence is 512.0 megabases in span. Most of the assembly is scaffolded into 8 chromosomal pseudomolecules. The mitochondrial and plastid genome assemblies have lengths of 298.57 kilobases and 139.15 kilobases in length, respectively.Mian, Sahr ; Christenhusz, Maarten J. M. ; Leitch, Ilia J. ; Leitch, Andrew R. ; Fay, Michael F. …
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2024
Journal article
The genome sequence of rosebay willowherb Chamaenerion angustifolium (L.) Scop., 1771 (syn. Epilobium angustifolium L., 1753) (Onagraceae).
We present a genome assembly from an individual (fireweed; Tracheophyta; Magnoliopsida; Myrtales; Onagraceae). The genome sequence is 655.9 megabases in span. Most of the assembly is scaffolded into 18 chromosomal pseudomolecules. The mitochondrial and plastid genome assemblies have lengths of 495.18 kilobases and 160.41 kilobases in length, respectively.Christenhusz, Maarten J. M. ; Leitch, Andrew R. ; Leitch, Ilia J. ; Fay, Michael F. ; Genome Acquisition Lab, Royal Botanic Gardens Kew, United Kingdom …
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2024
Journal article
The genome sequence of spotted medick, Medicago arabica (L.) Huds. (Fabaceae).
We present a genome assembly from an individual (the spotted medick; Tracheophyta; Magnoliopsida; Fabales; Fabaceae). The genome sequence is 515.5 megabases in span. Most of the assembly is scaffolded into 8 chromosomal pseudomolecules. The mitochondrial and plastid genome assemblies have lengths of 324.47 kilobases and 125.07 kilobases in length, respectively.Christenhusz, Maarten J. M. ; Fay, Michael F. ; Leitch, Ilia J. ; Royal Botanic Gardens Kew Genome Acquisition Lab, United Kingdom ; Plant Genome Sizing Collective …
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2024
Journal article
The genome sequence of subterranean clover, Trifolium subterraneum L. (Fabaceae).
We present a genome assembly from an individual (subterranean clover; Tracheophyta; Magnoliopsida; Fabales; Fabaceae). The genome sequence is 483.8 megabases in span. Most of the assembly is scaffolded into 8 chromosomal pseudomolecules. The mitochondrial and plastid genome assemblies have lengths of 309.28 kilobases and 144.76 kilobases in length, respectively. -
2023
Journal article
The genome sequence of soft rush, Juncus effusus (L.) Huds. (Juncaceae).
We present a genome assembly from a (soft rush; Tracheophyta; Magnoliopsida; Poales; Juncaceae). The genome sequence is 242.9 megabases in span. Most of the assembly is scaffolded into 21 chromosomal pseudomolecules. The mitochondrial genome is 519.0 kilobases long, while the plastid genome is 175.1 kilobases long.Christenhusz, Maarten J. M. ; Leitch, Ilia J. ; Genome Acquisition Lab, Royal Botanic Gardens, Kew, United Kingdom ; Darwin Tree of Life Barcoding collective ; Plant Genome Sizing collective …
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2023
Journal article
The genome sequence of black horehound, Ballota nigra L. subsp. foetida (Lam.) Hayek (Lamiaceae).
We present a genome assembly from a specimen of (black horehound; Tracheophyta; Magnoliopsida; Lamiales; Lamiaceae). The genome sequence is 1186.8 megabases in span. Most of the assembly is scaffolded into 11 chromosomal pseudomolecules. Three mitochondrial chromosomes were assembled, with lengths of 148,17, 121,67 and 125,74 kilobases. The chloroplast genome has...Christenhusz, Maarten J. M. ; Fay, Michael F. ; Leitch, Ilia J. ; Genome Acquisition Lab, Royal Botanic Gardens, Kew, United Kingdom ; Darwin Tree of Life Barcoding collective …
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2023
Journal article
The genome sequence of the tree of heaven, Ailanthus altissima (Mill.) Swingle, 1916.
We present a genome assembly from an individual (tree of heaven; Streptophyta; Magnoliopsida; Sapindales; Simaroubaceae). The genome sequence is 939 megabases in span. Most of the assembly is scaffolded into 31 chromosomal pseudomolecules. The mitochondrial and plastid genome assemblies are 661.1 kilobases and 161.1 kilobases long, respectively.Schley, Rowan J. ; Leitch, Ilia J. ; Christenhusz, Maarten J. M. ; Genome Acquisition Lab, Royal Botanic Gardens Kew, United Kingdom ; Darwin Tree of Life Barcoding collective …
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2023
Journal article
Giant Fern Genomes Show Complex Evolution Patterns: A Comparative Analysis in Two Species of Tmesipteris (Psilotaceae).
Giant genomes are rare across the plant kingdom and their study has focused almost exclusively on angiosperms and gymnosperms. The scarce genetic data that are available for ferns, however, indicate differences in their genome organization and a lower dynamism compared to other plant groups. Tmesipteris is a small genus of... -
2022
Journal article
A taxonomic, genetic and ecological data resource for the vascular plants of Britain and Ireland.
The vascular flora of Britain and Ireland is among the most extensively studied in the world, but the current knowledge base is fragmentary, with taxonomic, ecological and genetic information scattered across different resources. Here we present the first comprehensive data repository of native and alien species optimized for fast and...Henniges, Marie C. ; Powell, Robyn F. ; Mian, Sahr ; Stace, Clive A. ; Walker, Kevin J. …
Taxonomy, Ireland, Great Britain, Plant ecology, Genetics, Biodiversity, Ecology, and Literature mining