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Journal article
Orthologous nuclear markers and new transcriptomes that broadly cover the phylogenetic diversity of Acanthaceae
Premise: Information on orthologous groups of genes, their sequence variability, and annotation is required for project design in phylogenetic reconstruction. This resource is unavailable for the flowering plant family Acanthaceae (>4000 species). Methods: We compared transcriptome sequences spanning the extant diversity of Acanthaceae in order to provide a set of...Morais, Erica ; Schönenberger, Jürg ; Conti, Elena ; Antonelli, Alexandre ; Szövényi, Péter
transcriptomes, Lamiales, nuclear markers, Acanthaceae, and phylogeny
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Journal article
The Impact of Mutualisms on Species Richness
Mutualisms – cooperative interactions among different species – are known to influence global biodiversity. Nevertheless, theoretical and empirical work has led to divergent hypotheses about how mutualisms modulate diversity. We ask here when and how mutualisms influence species richness. Our synthesis suggests that mutualisms can promote or restrict species richness...Chomicki, Guillaume ; Weber, Marjorie ; Antonelli, Alexandre ; Bascompte, Jordi ; Kiers, Toby
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Journal article
Linking democracy and biodiversity conservation: Empirical evidence and research gaps
Increasing human pressure threatens plant and animal species with extinction worldwide. National political institutions constitute an important arena for biodiversity conservation. Yet, the relationship between how democratic these national institutions are and a country’s efforts towards and track-record for biodiversity conservation remains poorly understood. In this review, we outline the...Rydén, Oskar ; Zizka, Alexander ; Jagers, Sverker ; Lindberg, Staffan ; Antonelli, Alexandre
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Journal article
Human activity is altering the world’s zoogeographical regions
Zoogeographical regions, or zooregions, are areas of the Earth defined by species pools that reflect ecological, historical and evolutionary processes acting over millions of years. Consequently, researchers have assumed that zooregions are robust and unlikely to change on a human timescale. However, the increasing number of human-mediated introductions and extinctions...Bernardo-Madrid, Rubén ; Calatayud, Joaquín ; González-Suárez, Manuela ; Rosvall, Martin ; Lucas, Pablo …
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Journal article
Biodiversity seen through the perspective of insects: 10 simple rules on methodological choices and experimental design for genomic studies
Massively parallel DNA sequencing opens up opportunities for bridging multiple temporal and spatial dimensions in biodiversity research, thanks to its efficiency to recover millions of nucleotide polymorphisms. Here, we identify the current status, discuss the main challenges, and look into future perspectives on biodiversity genomics focusing on insects, which arguably...Matos-Maraví, Pável ; Duarte Ritter, Camila ; Barnes, Christopher ; Nielsen, Martin ; Olsson, Urban …
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Journal article
Advanced understanding of phylogenetic relationships, morphological evolution and biogeographic history of the mega-diverse plant genus Myrcia and its relatives (Myrtaceae: Myrteae)
Myrcia is the largest exclusively Neotropical genus of the plant family Myrtaceae with c. 770 species. Although several studies have elucidated the relationships within particular sections of the genus, to date no phylogeny has been produced that includes a broad taxonomic and geographic representation. Here we present a phylogenetic hypothesis...Amorim, Bruno ; Vasconcelos, Thais ; Souza, Gustavo ; Alves, Marccus ; Antonelli, Alexandre …
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Journal article
Ancient polyploidy and genome evolution in palms
Mechanisms of genome evolution are fundamental to our understanding of adaptation and the generation and maintenance of biodiversity, yet genome dynamics are still poorly characterized in many clades. Strong correlations between variation in genomic attributes and species diversity across the plant tree of life suggest that polyploidy or other mechanisms...Barrett, Craig ; McKain, Michael ; Sinn, Brandon ; Ge, Xue-Jun ; Zhang, Yuqu …
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Journal article
Building mountain biodiversity: Geological and evolutionary processes
Mountain regions are unusually biodiverse, with rich aggregations of small-ranged species that form centers of endemism. Mountains play an array of roles for Earth’s biodiversity and affect neighboring lowlands through biotic interchange, changes in regional climate, and nutrient runoff. The high biodiversity of certain mountains reflects the interplay of multiple...Rahbek, Carsten ; Borregaard, Michael ; Antonelli, Alexandre ; Colwell, Robert ; Holt, Ben …