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Journal article
A roadmap for global synthesis of the plant tree of life
Providing science and society with an integrated, up‐to‐date, high quality, open, reproducible and sustainable plant tree of life would be a huge service that is now coming within reach. However, synthesizing the growing body of DNA sequence data in the public domain and disseminating the trees to a diverse audience... -
Journal article
Linking democracy and biodiversity conservation: Empirical evidence and research gaps
Increasing human pressure threatens plant and animal species with extinction worldwide. National political institutions constitute an important arena for biodiversity conservation. Yet, the relationship between how democratic these national institutions are and a country’s efforts towards and track-record for biodiversity conservation remains poorly understood. In this review, we outline the...Rydén, Oskar ; Zizka, Alexander ; Jagers, Sverker ; Lindberg, Staffan ; Antonelli, Alexandre
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Journal article
Species limits in butterflies (Lepidoptera: Nymphalidae): reconciling classical taxonomy with the multispecies coalescent
Species delimitation is at the core of biological sciences. During the last decade, molecular‐based approaches have advanced the field by providing additional sources of evidence to classical, morphology‐based taxonomy. However, taxonomy has not yet fully embraced molecular species delimitation beyond threshold‐based, single‐gene approaches, and taxonomic knowledge is not commonly integrated...Matos‐Maraví, Pável ; Wahlberg, Niklas ; Antonelli, Alexandre ; Penz, Carla M.
Insect Science and Ecology, Evolution, Behavior and Systematics
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Journal article
Drivers of bromeliad leaf and floral bract variation across a latitudinal gradient in the Atlantic Forest
Aim Understanding the complex interaction and relative contributions of factors involved in species and trait diversification is crucial to gain insights into the evolution of Neotropical biodiversity. Here, we investigated the drivers of morphological variation in bromeliads along a latitudinal gradient in a biodiversity hotspot. Location Atlantic Forest, Brazil. Taxon...Neves, Beatriz ; Zanella, Camila M. ; Kessous, Igor M. ; Uribbe, Fernando P. ; Salgueiro, Fabiano …
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Journal article
Human activity is altering the world’s zoogeographical regions
Zoogeographical regions, or zooregions, are areas of the Earth defined by species pools that reflect ecological, historical and evolutionary processes acting over millions of years. Consequently, researchers have assumed that zooregions are robust and unlikely to change on a human timescale. However, the increasing number of human-mediated introductions and extinctions...Bernardo-Madrid, Rubén ; Calatayud, Joaquín ; González-Suárez, Manuela ; Rosvall, Martin ; Lucas, Pablo …
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Journal article
Unlocking the properties of plants and fungi for sustainable development
Humans have been using biodiversity for hundreds of thousands of years, but at no time in our history has it been more crucial to accelerate our exploration of the useful properties of the species that inhabit the world around us.Antonelli, Alexandre ; Smith, Rhian J. ; Simmonds, Monique S. J.
fungi, properties, sustainable development, biodiversity, SDGs, and plants
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Journal article
The effects of climate change on the distribution of South American antbirds (Thamnophilus punctatus complex) as affected by niche divergences and contact zone interactions between species
Several studies have shown that climatic change has been accelerating due to human activities, leading to dramatic effects on biodiversity. Modeling studies describe how species have reacted in the past to climatic change, and this information can help us to understand the degree of biotic susceptibility to current and future...da Silva, Erasmo Andrade ; de Araujo, Helder Farias Pereira ; Aleixo, Alexandre ; Antonelli, Alexandre ; Fernandes, Alexandre
South America, Birds, Climate change, and Niche conservatism
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Journal article
Building mountain biodiversity: Geological and evolutionary processes
Mountain regions are unusually biodiverse, with rich aggregations of small-ranged species that form centers of endemism. Mountains play an array of roles for Earth’s biodiversity and affect neighboring lowlands through biotic interchange, changes in regional climate, and nutrient runoff. The high biodiversity of certain mountains reflects the interplay of multiple...Rahbek, Carsten ; Borregaard, Michael ; Antonelli, Alexandre ; Colwell, Robert ; Holt, Ben …
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Journal article
Why mountains matter for biodiversity
Mountains are arguably Earth's most striking features. They play a major role in determining global and regional climates, are the source of most rivers, act as cradles, barriers and bridges for species, and are crucial for the survival and sustainability of many human societies. The complexity of mountains is tightly...Perrigo, Allison ; Hoorn, Carina ; Antonelli, Alexandre
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Journal article
Ancient polyploidy and genome evolution in palms
Mechanisms of genome evolution are fundamental to our understanding of adaptation and the generation and maintenance of biodiversity, yet genome dynamics are still poorly characterized in many clades. Strong correlations between variation in genomic attributes and species diversity across the plant tree of life suggest that polyploidy or other mechanisms...Barrett, Craig ; McKain, Michael ; Sinn, Brandon ; Ge, Xue-Jun ; Zhang, Yuqu …
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Journal article
The Impact of Mutualisms on Species Richness
Mutualisms – cooperative interactions among different species – are known to influence global biodiversity. Nevertheless, theoretical and empirical work has led to divergent hypotheses about how mutualisms modulate diversity. We ask here when and how mutualisms influence species richness. Our synthesis suggests that mutualisms can promote or restrict species richness...Chomicki, Guillaume ; Weber, Marjorie ; Antonelli, Alexandre ; Bascompte, Jordi ; Kiers, Toby
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Journal article
The pitfalls of biodiversity proxies: Differences in richness patterns of birds, trees and understudied diversity across Amazonia
Most knowledge on biodiversity derives from the study of charismatic macro-organisms, such as birds and trees. However, the diversity of micro-organisms constitutes the majority of all life forms on Earth. Here, we ask if the patterns of richness inferred for macro-organisms are similar for micro-organisms. For this, we barcoded samples...Ritter, Camila D. ; Faurby, Søren ; Bennett, Dominic J. ; Naka, Luciano N. ; ter Steege, Hans …
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Journal article
A novel phylogenetic infrageneric classification of Baccharis (Asteraceae: Astereae), a highly diversified American genus
We present the hitherto most comprehensive phylogenetic hypothesis for Baccharis. Our results confirm that subtribe Baccharidinae is a monogeneric group and support a broad circumscription of Baccharis as monophyletic with the inclusion of all genera that have been previously segregated from it (Baccharidastrum, Baccharidiopsis, Heterothalamulopsis, Heterothalamus, Lanugothamnus). We provide comprehensive...Heiden, Gustavo ; Antonelli, Alexandre ; Pirani, José Rubens
Plant Science and Ecology, Evolution, Behavior and Systematics
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Journal article
Advanced understanding of phylogenetic relationships, morphological evolution and biogeographic history of the mega-diverse plant genus Myrcia and its relatives (Myrtaceae: Myrteae)
Myrcia is the largest exclusively Neotropical genus of the plant family Myrtaceae with c. 770 species. Although several studies have elucidated the relationships within particular sections of the genus, to date no phylogeny has been produced that includes a broad taxonomic and geographic representation. Here we present a phylogenetic hypothesis...Amorim, Bruno ; Vasconcelos, Thais ; Souza, Gustavo ; Alves, Marccus ; Antonelli, Alexandre …
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Journal article
Orthologous nuclear markers and new transcriptomes that broadly cover the phylogenetic diversity of Acanthaceae
Premise: Information on orthologous groups of genes, their sequence variability, and annotation is required for project design in phylogenetic reconstruction. This resource is unavailable for the flowering plant family Acanthaceae (>4000 species). Methods: We compared transcriptome sequences spanning the extant diversity of Acanthaceae in order to provide a set of...Morais, Erica ; Schönenberger, Jürg ; Conti, Elena ; Antonelli, Alexandre ; Szövényi, Péter
transcriptomes, Lamiales, nuclear markers, Acanthaceae, and phylogeny