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Journal article
Notes on Galtonia (Hyacinthaceae) and a Description of the New Hybrid Galtonia ×ceredigionis.
The history and typification of the five species belonging in the genus Galtonia Decne. (Hyacinthaceae) are discussed. Lectotypes are designated for the names Hyacinthus candicans Baker and Ornithogalum saundersiae Baker. The new spontaneous hybrid Galtonia ×ceredigionis J. Compton & Schrire, formed from a natural cross between G. candicans (Baker) Decne....Compton, James A. ; Schrire, Brian D.
Identification key, Typification, Galtonia, Ornithogalum, Hyacinthus, and Hybrid
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Journal article
Land‐use intensity and relatedness to native plants promote exotic plant invasion in a tropical biodiversity hotspot.
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Journal article
The genome sequence of strawberry clover, Trifolium fragiferum L. (Fabaceae).
We present a genome assembly from an individual (strawberry clover; Tracheophyta; Magnoliopsida; Fabales; Fabaceae). The genome sequence is 512.0 megabases in span. Most of the assembly is scaffolded into 8 chromosomal pseudomolecules. The mitochondrial and plastid genome assemblies have lengths of 298.57 kilobases and 139.15 kilobases in length, respectively.Mian, Sahr ; Christenhusz, Maarten J. M. ; Leitch, Ilia J. ; Leitch, Andrew R. ; Fay, Michael F. …
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Journal article
The genome sequence of black poplar, Populus nigra subsp. betulifolia L., 1753 (Salicaceae).
We present a genome assembly from an individual subsp. (black poplar; Tracheophyta; Malpighiales; Salicaceae). The genome sequence is 413.2 megabases in span. Most of the assembly (99.73%) is scaffolded into 19 chromosomal pseudomolecules. Mitochondrial and plastid genomes were also assembled. Three mitochondrial assemblies have lengths of 281.85, 335.57 and 186.15... -
Journal article
The genome sequence of lesser trefoil or Irish shamrock, Trifolium dubium Sibth. (Fabaceae).
We present a genome assembly from an individual (lesser trefoil; Tracheophyta; Magnoliopsida; Fabales; Fabaceae) as part of a collaboration between the Darwin Tree of Life and the European Reference Genome Atlas. The genome sequence is 679.1 megabases in span. Most of the assembly is scaffolded into 15 chromosomal pseudomolecules. The...Ruhsam, Markus ; Hollingsworth, Peter M ; Mc Cartney, Ann M. ; Herron, Katie E. ; Hughes, Graham M. …
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Journal article
An expanded circumscription of Trichocentrum (Orchidaceae: Oncidiinae) to include Grandiphyllum and Saundersia.
The genus Trichocentrum is again expanded, this time to include Grandiphyllum and Saundersia, and the respective combinations are made.Meneguzzo, Tniago E. C. ; Chase, Mark W.
Taxonomy, Orchid taxonomy, Brazilian orchids, Neotropical orchids, Trichocentrum, Cymbidieae, Orchidaceae, Orchids, Saundersia, and Grandiphyllum
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Journal article
A glimpse into the diversity of Colombian Acanthaceae.
A short visit to four Colombian herbaria in 2022 is highlighted as an example of modern-day herbarium plant hunting which resulted in the discovery of 14 new species: J.R.I.Wood, J.R.I.Wood & Hoyos-Gómez, J.R.I.Wood, J.R.I.Wood, J.R.I.Wood & Hoyos-Gómez, J.R.I.Wood & Hoyos-Gómez, J.R.I.Wood, J.R.I.Wood & Hoyos-Gómez, J.R.I.Wood, J.R.I.Wood, J.R.I.Wood, J.R.I.Wood & Hoyos-Gómez...Wood, John R. I. ; Hoyos-Gómez, Saúl E. ; Granados Zarate, David E.
Hotspots, Colombia, Aphelandra, New species, Herbaria, Ruellia, Justicia, Plant hunting, Acanthaceae, and Rheophytes
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Journal article
Nitrogen-fixing and non-nitrogen-fixing legume plants differ in leaf nutrient concentrations and relationships between photosynthetic and hydraulic traits.
Legumes account for a significant proportion of plants in the terrestrial ecosystems. Nitrogen-fixing capability of certain legumes is a pivotal trait that contributes to their ecological dominance. Yet, the functional traits and trait relationships between N-fixer and non-N-fixer legumes are poorly understood. Here, we investigated 27 functional traits associated with... -
Journal article
Estimation of contemporary effective population size in plant populations: Limitations of genomic datasets.
Effective population size ( ) is a pivotal evolutionary parameter with crucial implications in conservation practice and policy. Genetic methods to estimate have been preferred over demographic methods because they rely on genetic data rather than time‐consuming ecological monitoring. Methods based on linkage disequilibrium (LD), in particular, have become popular... -
Journal article
Phylogenomics and the rise of the angiosperms
Angiosperms are the cornerstone of most terrestrial ecosystems and human livelihoods1,2. A robust understanding of angiosperm evolution is required to explain their rise to ecological dominance. So far, the angiosperm tree of life has been determined primarily by means of analyses of the plastid genome3,4. Many studies have drawn on...Zuntini, Alexandre R. ; Carruthers, Tom ; Maurin, Olivier ; Bailey, Paul C. ; Leempoel, Kevin …
Plant evolution, Angiosperms, Phylogenetics, Speciation, and Phylogenomics
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Book chapter
35. Samanea clade.
Lewis, Gwilym P.
Diversity, Fabaceae, Classification, Leguminosae, Neltuma, Mimosoideae, Phylogenomics, and Taxonomy
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Journal article
Nine new species of Australian Nicotiana (Solanaceae).
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Journal article
Reinstating Dyfrolomyces and introducing Melomastia pyriformis sp. nov. (Pleurotremataceae, Dyfrolomycetales) from Guangdong Province, China.
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Journal article
The complete mitochondrial genome of Trigonisca nataliae (Hymenoptera, Apidae) assemblage reveals heteroplasmy in the control region.
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Journal article
Checklist of Orchidaceae from Caquetá, Colombia.
A checklist of Orchidaceae from Caquetá, Colombia is presented here. We recorded 98 genera and 418 species, exceeding a previous inventory by 276 species. The checklist is conservative in the number of genera and species by including only taxa that were fully and reliably identified and that are either linked... -
Journal article
The forgotten giant of the Pacific: a review on giant taro (Alocasia macrorrhizos (L.) G.Don).
This article provides an overview over taxonomy, distribution, cultivation and use of giant taro, (L.) G.Don. The species belongs to the Araceae (aroid) family, which consists of 3700 species grouped into 107 genera. Among those species are several important crop species from tropical Asia and America. Giant taro, with a...Müller, Jonas V. ; Guzzon, Filippo
Araceae, Pacific Region, Alocasia macrorrhizos, Gene bank, Plant genetic resources, Neglected crop, Conservation, Aroids, and Breeding
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Journal article
Taxonomy and lectotypification of Lepidagathis hamiltoniana (Acanthaceae: Barlerieae), an endemic species of India.
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Journal article
Repeated evolution of pollination syndromes in a highly diverse bromeliad lineage is correlated with shifts in life form and habitat.
Mutualistic plant-pollinator interactions play a critical role in the diversification of flowering plants. The spatiotemporal correlates of such interactions can be understood in a phylogenetic context. Here, we generate ddRAD-seq data for the highly diverse Vriesea-Stigmatodon lineage to test for correlated trait evolution among pollination syndromes and life form, habitat... -
Journal article
Taxonomic notes on Thrixspermum (Orchidaceae: Aeridinae), with five new species from Thailand.
Five new species of Thrixspermum (Orchidaceae) are described from Thailand, two from sect. Dendrocolla: T. alboluteum (South-West floristic region), T. praetermissum (East); and three from sect. Thrixspermum: T. simile (South-East), T. flammeum (East), T. polystictum (East). Descriptions, illustrations, notes on distribution, ecology, phenology, conservation status, and morphological comparisons with allied...Toolmal, Nopparut ; Suddee, Somran ; Culham, Alastair ; Utteridge, Timothy ; Schuiteman, André
Taxonomy, Aeridinae, Thailand, Section Thrixspermum, Thrixspermum, New species, and Section Dendrocolla
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Journal article
Revision of Indigofera section Oligophyllae (Fabaceae: Indigofereae) from South Africa.
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Journal article
Rediscovery of the lost skink Proscelotes aenea and implications for conservation.
Biodiversity loss is recognized as a grand challenge of the twenty-first century but ascertaining when a species is “lost” can be incredibly difficult—since the absence of evidence is not evidence of absence. This may be a relatively easy task for large and conspicuous animals, but extremely difficult for those living...Puruleia, Ali ; Nanvonamuquitxo, Cristóvão ; Ernesto, Milagre ; Jamal, Abdurabe ; Amade, Iassine …
Skinks, Proscelotes aenea, Lumbo (Mozambique), Mozambique, and Threatened species
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Journal article
Comparative analysis of repeat content in plant genomes, large and small.
The DNA Features pipeline is the analysis pipeline at EMBL-EBI that annotates repeat elements, including transposable elements. With Ensembl’s goal to stay at the cutting edge of genome annotation, we proved that this pipeline needed an update. We then created a new analysis that allowed the Ensembl database to store...Argentin, Joris ; Bolser, Dan ; Kersey, Paul J. ; Flicek, Paul
Genomics, Transposons, Plants, Annotation, Comparative analysis, and Pipeline
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Journal article
Indigenous crop diversity maintained despite the introduction of major global crops in an African centre of agrobiodiversity.
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Journal article
Disrupting iron homeostasis can potentiate colistin activity and overcome colistin resistance mechanisms in Gram-Negative Bacteria.
is a Gram-negative priority pathogen that can readily overcome antibiotic treatment through a range of intrinsic and acquired resistance mechanisms. Treatment of carbapenem-resistant largely relies on the use of colistin in cases where other treatment options have been exhausted. However, the emergence of resistance against this last-line drug has significantly... -
Journal article
Cytotoxic Evaluation and Elucidation of Dammarane-Type Triterpenoids Isolated from the Exocarp of Aglaia cucullata (Meliaceae).
Aglaia cucullata is a mangrove plant with a tropical Asian distribution. It is used as traditional medicine for the treatment of diarrhea, inflammation, skin diseases, and heart diseases. Several compounds isolated from A. cucullata have demonstrated cytotoxic activity against various human cancer cells. Cancer therapies such as surgery, chemo-, and...Purnama, ... ; Anjari, Intan Hawina ; Farabi, Kindi ; Runadi, Dudi ; Mayanti, Tri …
Triterpenoid, Meliaceae, Melanoma, Aglaia cucullata, and Cytotoxic
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Journal article
Evolution of Seed Dispersal Modes in the Orchidaceae: Has the Vanilla Mystery Been Solved?
Orchid seeds are predominantly wind-dispersed, often developed within dry, dehiscent fruits that typically release millions of dust-like seeds into the air. Animal-mediated seed dispersal is a lesser-known phenomenon in the family and predominantly occurs in groups belonging to early-diverging lineages bearing indehiscent, fleshy fruits with hard, rounded, dark seeds. In... -
Journal article
Complementing model species with model clades.
Model species continue to underpin groundbreaking plant science research. At the same time, the phylogenetic resolution of the land plant Tree of Life continues to improve. The intersection of these two research paths creates a unique opportunity to further extend the usefulness of model species across larger taxonomic groups. Here... -
Journal article
A first draft genome of holm oak (Quercus ilex subsp. ballota), the most representative species of the Mediterranean forest and the Spanish agrosylvopastoral ecosystem “dehesa”.
The holm oak ( subsp. ) is the most representative species of the Mediterranean Basin and the agrosylvopastoral Spanish “ ” ecosystem. Being part of our life, culture, and subsistence since ancient times, it has significant environmental and economic importance. More recently, there has been a renewed interest in using... -
Journal article
A new Ypsilopus (Orchidaceae, Angraecinae) from Zimbabwe and notes on the parallel evolution of extreme column exsertion in African angraecoids.
– A preliminary review of hawkmoth-pollinated angraecoids from Africa unveiled a remarkable case of parallel evolution of extreme column exsertion between the two species formerly classified in in the defunct genus . These belong to one clade of , including and , and Ypsilopus sect. Barombiella, including and . The... -
Journal article
Island area, isolation and climate effects upon flower traits in a megadiverse archipelago.
Trethowan, Liam A. ; Jennings, Laura ; Bramley, Gemma ; Briggs, Marie ; Clark, Ruth …
Flower colour, Islands, Calyx length, Flower size, Malesia, Evolution, Corolla length, and Reproductive traits
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Master's dissertation
A Taxonomic Synopsis of Ranunculus in New Guinea.
Lewis, Saskia
Endemic species, Ranunculaceae, New Guinea, Conservation, and Taxonomy
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Master's dissertation
Non-pathogenic Fungi Among Killer Ophiocordyceps: Phylogenetic Investigation Into Yeast-Like Endosymbionts of Coccid (Hemiptera: Sternorrhyncha) Species.
Bonser, Tom
Coccids, Scale insects, Ophiocordyceps, Endosymbionts, Phylogenetics, Non-pathogenic fungi, Yeast-like symbionts, and Symbiosis
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Master's dissertation
Seed Trait Diversity of Alnus glutinosa Across the UK.
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Master's dissertation
Rapid Baseline Ecological Assessment of Two Different Land Management Systems, Traditional Garden and Ecological Landscape, at Wakehurst.
Png, Jun Qiang
Royal Botanic Gardens, Kew. Wakehurst Place, Ecological assessment, Restoration, qPCR, Pollination, Carbon efflux, and Land management
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Journal article
Phylogenomic and morphological data reveal hidden patterns of diversity in the national tree of Brazil, Paubrasilia echinata.
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Journal article
1068. Amorphophallus ongsakulii Hett. & A.Galloway: Araceae.
Hett. & A.Galloway is illustrated from plants cultivated by the authors. Its ecology, distribution, and systematics are described, along with notes on cultivation.Dodsworth, Steven ; Phillips, Charlotte ; Lambkin, Deborah
Cultivation, Nomenclature, Etymology, Geographical distribution, Habitat, Amorphophallus ongsakulii, Descriptors, and Plant ecology
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Journal article
Re‐evaluating the importance of threatened species in maintaining global phytoregions.
Brown, Matilda J. M. ; Walker, Barnaby E. ; Budden, Andrew P. ; Nic Lughadha, Eimear
Phytoregions, Biotic homogenisation, Threatened species, Introductions, Extinctions, Infomap, and Network analysis
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Journal article
Phylogenomics sheds new light on the drivers behind a long‐lasting systematic riddle: the figwort family Scrophulariaceae.
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Journal article
The big four of plant taxonomy – a comparison of global checklists of vascular plant names.
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Book chapter
Collection Features.
Molmou, Denise
Local communities, Guinea, National herbaria, Local authorities, and Fieldwork
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