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Journal article
Specimen and sample metadata standards for biodiversity genomics: a proposal from the Darwin Tree of Life project.
The vision of the is to complete reference genomes for all of the planet’s ~2M described eukaryotic species in the coming decade. To contribute to this global endeavour, the (DToL ) was launched in 2019 with the aim of generating complete genomes for the ~70k described eukaryotic species that can... -
Journal article
The genome sequence of the oyster mushroom, Pleurotus ostreatus ((Jacq.) P. Kummer, 1871).
We present a genome assembly from a specimen (the oyster mushroom; Basidiomycota; Agaricomycetes; Agaricales; Pleurotaceae). The genome sequence is 40.6 megabases in span. Most of the assembly is scaffolded into 12 chromosomal pseudomolecules. Two mitochondrial genomes have been assembled, which are 73.1 and 9.3 kilobases in length. -
Journal article
The genome sequence of bittersweet, Solanum dulcamara L. (Solanaceae).
We present a genome assembly from an individual (bittersweet; Eudicot; Magnoliopsida; Solanales; Solanaceae). The genome sequence is 946.3 megabases in span. Most of the assembly is scaffolded into 12 chromosomal pseudomolecules. The mitochondrial and plastid genomes have also been assembled, with lengths of 459.22 kilobases and 161.98 kilobases respectively. -
Journal article
The genome sequence of soft rush, Juncus effusus (L.) Huds. (Juncaceae).
We present a genome assembly from a (soft rush; Tracheophyta; Magnoliopsida; Poales; Juncaceae). The genome sequence is 242.9 megabases in span. Most of the assembly is scaffolded into 21 chromosomal pseudomolecules. The mitochondrial genome is 519.0 kilobases long, while the plastid genome is 175.1 kilobases long.Christenhusz, Maarten J. M. ; Leitch, Ilia J. ; Genome Acquisition Lab, Royal Botanic Gardens, Kew, United Kingdom ; Darwin Tree of Life Barcoding collective ; Plant Genome Sizing collective …
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Journal article
The genome sequence of the silverweed cinquefoil, Potentilla anserina L., 1753.
We present a genome assembly from a specimen of (the silverweed cinquefoil; Streptophyta; eudicotyledons; Rosales; Potentilleae). The haploid genome sequence is 237 megabases in span. Most of the assembly is scaffolded into seven chromosomal pseudomolecules. The mitochondrial and plastid genomes have also been assembled and are 294.6 and 155.6 kilobases...Christenhusz, Maarten J. M. ; Leitch, Ilia J ; Genome Acquisition Lab, Royal Botanic Gardens, Kew, United Kingdom ; Plant Genome Sizing collective ; Darwin Tree of Life Barcoding collective …
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Journal article
The genome sequence of common fleabane, Pulicaria dysenterica (L.) Bernh. (Asteraceae).
We present a genome assembly from an individual (common fleabane; Tracheophyta; Magnoliopsida; Asterales; Asteraceae). The genome sequence is 833.2 megabases in span. Most of the assembly is scaffolded into 9 chromosomal pseudomolecules. The mitochondrial and plastid genomes were assembled and have lengths of 375.47 kilobases and 150.94 kilobases respectively.Christenhusz, Maarten J. M. ; Fay, Michael F. ; Genome Acquisition Lab, Royal Botanic Gardens, Kew, United Kingdom ; Darwin Tree of Life Barcoding collective ; Plant Genome Sizing collective …
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Journal article
The genome sequence of the marsh skullcap, Scutellaria galericulata L.
We present a genome assembly from an individual (the marsh skullcap; Streptophyta; Magnoliopsida; Lamiales; Lamiaceae). The genome sequence is 328 megabases in span. Most of the assembly is scaffolded into 15 chromosomal pseudomolecules. The mitochondrial and plastid genomes have also been assembled and have lengths of 326.5 kilobases and 152.6...Mian, Sahr ; Christenhusz, Maarten J. M. ; Howes, Melanie-Jayne R. ; Genome Acquisition Lab, Royal Botanic Gardens, Kew, United Kingdom ; Darwin Tree of Life Barcoding collective …
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Journal article
The genome sequence of black horehound, Ballota nigra L. subsp. foetida (Lam.) Hayek (Lamiaceae).
We present a genome assembly from a specimen of (black horehound; Tracheophyta; Magnoliopsida; Lamiales; Lamiaceae). The genome sequence is 1186.8 megabases in span. Most of the assembly is scaffolded into 11 chromosomal pseudomolecules. Three mitochondrial chromosomes were assembled, with lengths of 148,17, 121,67 and 125,74 kilobases. The chloroplast genome has...Christenhusz, Maarten J. M. ; Fay, Michael F. ; Leitch, Ilia J. ; Genome Acquisition Lab, Royal Botanic Gardens, Kew, United Kingdom ; Darwin Tree of Life Barcoding collective …
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Journal article
The genome sequence of the common toadflax, Linaria vulgaris Mill., 1768.
We present a genome assembly from a specimen (the common toadflax; Streptophyta; Magnoliopsida; Lamiales; Plantaginaceae). The genome sequence is 760.5 megabases in span. Most of the assembly is scaffolded into six chromosomal pseudomolecules. Two mitochondrial genomes were assembled, which were 330.8 and 144.0 kilobases long. The plastid genome was also... -
Journal article
The genome sequence of thale cress, Arabidopsis thaliana (Heynh., 1842).
We present a genome assembly of an specimen (thale cress; Streptophyta; Magnoliopsida; Brassicales; Brassicaceae). The genome sequence spans 138 megabases. Most of the assembly (98.76%) is scaffolded into five chromosomal pseudomolecules. The mitochondrial and plastid genomes were also assembled and are 368.8 and 154.5 kilobases in length respectively.Christenhusz, Maarten J.M. ; Twyford, Alex D. ; Hudson, Andrew ; Genome Acquisition Lab, Royal Botanic Gardens, Kew ; Genome Acquisition Lab, Royal Botanic Garden, Edinburgh …