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Journal article
Sequence locally, think globally: The Darwin Tree of Life Project.
The goals of the Earth Biogenome Project—to sequence the genomes of all eukaryotic life on earth—are as daunting as they are ambitious. The Darwin Tree of Life Project was founded to demonstrate the credibility of these goals and to deliver at-scale genome sequences of unprecedented quality for a biogeographic region:...The Darwin Tree of Life Project Consortium
Genome, Assembly, Biodiversity, Sequencing, and Darwin Tree of Life Project
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Journal article
Specimen and sample metadata standards for biodiversity genomics: a proposal from the Darwin Tree of Life project.
The vision of the is to complete reference genomes for all of the planet’s ~2M described eukaryotic species in the coming decade. To contribute to this global endeavour, the (DToL ) was launched in 2019 with the aim of generating complete genomes for the ~70k described eukaryotic species that can... -
Journal article
The genome sequence of the apple, Malus domestica (Suckow) Borkh., 1803.
We present genome assemblies from four cultivars (the apple; Streptophyta; Magnoliopsida; Rosales; Rosaceae). The genome sequences are 643–653 megabases in span. The greater part of each assembly length (99.24–99.74%) is scaffolded into 17 chromosomal pseudomolecules. The mitochondrial and plastid genomes were also assembled and are 400 kilobases and 167 kilobases...Könyves, Kálmán ; Mian, Sahr ; Johns, Jennifer ; Ruhsam, Markus ; Leitch, Ilia J. …
Malus domestica, DNA sequence, Apples, Cultivars, and Genome sequence
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Journal article
The genome sequence of the oyster mushroom, Pleurotus ostreatus ((Jacq.) P. Kummer, 1871).
We present a genome assembly from a specimen (the oyster mushroom; Basidiomycota; Agaricomycetes; Agaricales; Pleurotaceae). The genome sequence is 40.6 megabases in span. Most of the assembly is scaffolded into 12 chromosomal pseudomolecules. Two mitochondrial genomes have been assembled, which are 73.1 and 9.3 kilobases in length. -
Journal article
The genome sequence of the tree of heaven, Ailanthus altissima (Mill.) Swingle, 1916.
We present a genome assembly from an individual (tree of heaven; Streptophyta; Magnoliopsida; Sapindales; Simaroubaceae). The genome sequence is 939 megabases in span. Most of the assembly is scaffolded into 31 chromosomal pseudomolecules. The mitochondrial and plastid genome assemblies are 661.1 kilobases and 161.1 kilobases long, respectively.Schley, Rowan J. ; Leitch, Ilia J. ; Christenhusz, Maarten J. M. ; Genome Acquisition Lab, Royal Botanic Gardens Kew, United Kingdom ; Darwin Tree of Life Barcoding collective …
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Journal article
The genome sequence of thale cress, Arabidopsis thaliana (Heynh., 1842).
We present a genome assembly of an specimen (thale cress; Streptophyta; Magnoliopsida; Brassicales; Brassicaceae). The genome sequence spans 138 megabases. Most of the assembly (98.76%) is scaffolded into five chromosomal pseudomolecules. The mitochondrial and plastid genomes were also assembled and are 368.8 and 154.5 kilobases in length respectively.Christenhusz, Maarten J.M. ; Twyford, Alex D. ; Hudson, Andrew ; Genome Acquisition Lab, Royal Botanic Gardens, Kew ; Genome Acquisition Lab, Royal Botanic Garden, Edinburgh …
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Journal article
The genome sequence of the marsh skullcap, Scutellaria galericulata L.
We present a genome assembly from an individual (the marsh skullcap; Streptophyta; Magnoliopsida; Lamiales; Lamiaceae). The genome sequence is 328 megabases in span. Most of the assembly is scaffolded into 15 chromosomal pseudomolecules. The mitochondrial and plastid genomes have also been assembled and have lengths of 326.5 kilobases and 152.6...Mian, Sahr ; Christenhusz, Maarten J. M. ; Howes, Melanie-Jayne R. ; Genome Acquisition Lab, Royal Botanic Gardens, Kew, United Kingdom ; Darwin Tree of Life Barcoding collective …
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Journal article
The genome sequence of the common toadflax, Linaria vulgaris Mill., 1768.
We present a genome assembly from a specimen (the common toadflax; Streptophyta; Magnoliopsida; Lamiales; Plantaginaceae). The genome sequence is 760.5 megabases in span. Most of the assembly is scaffolded into six chromosomal pseudomolecules. Two mitochondrial genomes were assembled, which were 330.8 and 144.0 kilobases long. The plastid genome was also...
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